Protein–RNA interactions for Protein: P25785

Timp2, Metalloproteinase inhibitor 2, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp2P25785 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Timp2P25785 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Timp2P25785 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Timp2P25785 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.32■□□□□ 0.36
Timp2P25785 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.32■□□□□ 0.36
Timp2P25785 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Timp2P25785 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Timp2P25785 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Timp2P25785 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Timp2P25785 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Timp2P25785 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.31■□□□□ 0.36
Timp2P25785 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Timp2P25785 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Timp2P25785 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Timp2P25785 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Timp2P25785 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.3■□□□□ 0.36
Timp2P25785 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.3■□□□□ 0.36
Timp2P25785 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Timp2P25785 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Timp2P25785 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Timp2P25785 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Timp2P25785 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.29■□□□□ 0.36
Timp2P25785 Gm27463-201ENSMUST00000183569 57 ntBASIC17.29■□□□□ 0.36
Timp2P25785 Gm7977-201ENSMUST00000193787 748 ntBASIC17.29■□□□□ 0.36
Timp2P25785 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.29■□□□□ 0.36
Timp2P25785 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.29■□□□□ 0.36
Timp2P25785 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.29■□□□□ 0.36
Timp2P25785 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Timp2P25785 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Timp2P25785 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Timp2P25785 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Timp2P25785 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Timp2P25785 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Timp2P25785 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.28■□□□□ 0.36
Timp2P25785 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.28■□□□□ 0.36
Timp2P25785 Gm10231-201ENSMUST00000181584 441 ntBASIC17.28■□□□□ 0.36
Timp2P25785 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Gm7889-201ENSMUST00000185591 958 ntBASIC17.28■□□□□ 0.36
Timp2P25785 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 Gm10175-202ENSMUST00000208752 441 ntBASIC17.28■□□□□ 0.36
Timp2P25785 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Timp2P25785 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms