Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2al1kJ3QP08 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
H2al1kJ3QP08 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Gm25927-201ENSMUST00000175058 117 ntBASIC10.21□□□□□ -0.77
H2al1kJ3QP08 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
H2al1kJ3QP08 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H2al1kJ3QP08 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms