Protein–RNA interactions for Protein: A6PWP4

Gm11627, MCG21374, isoform CRA_a, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11627A6PWP4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Gm43702-201ENSMUST00000198772 2546 ntBASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm11627A6PWP4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Gm5408-201ENSMUST00000197998 747 ntBASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm11627A6PWP4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.41□□□□□ -0.58
Gm11627A6PWP4 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm11627A6PWP4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11627A6PWP4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.58
Gm11627A6PWP4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm11627A6PWP4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Gm11627A6PWP4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms