Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-2A0A0G2JF93 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav13n-2A0A0G2JF93 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav13n-2A0A0G2JF93 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm7860-201ENSMUST00000121190 879 ntBASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Gm8969-201ENSMUST00000199694 526 ntBASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav13n-2A0A0G2JF93 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav13n-2A0A0G2JF93 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms