Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16A0A075B653 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.66□□□□□ -0.22
Trav16A0A075B653 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.66□□□□□ -0.22
Trav16A0A075B653 Gm8493-201ENSMUST00000196881 489 ntBASIC13.66□□□□□ -0.22
Trav16A0A075B653 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav16A0A075B653 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16A0A075B653 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.66□□□□□ -0.22
Trav16A0A075B653 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Gm43173-201ENSMUST00000202246 593 ntBASIC13.65□□□□□ -0.22
Trav16A0A075B653 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16A0A075B653 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Trav16A0A075B653 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav16A0A075B653 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.64□□□□□ -0.23
Trav16A0A075B653 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.64□□□□□ -0.23
Trav16A0A075B653 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16A0A075B653 Haglr-201ENSMUST00000100000 2085 ntBASIC13.63□□□□□ -0.23
Trav16A0A075B653 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav16A0A075B653 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16A0A075B653 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms