Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Sox18P43680 Gm24622-201ENSMUST00000082619 162 ntBASIC6.68□□□□□ -1.34
Sox18P43680 Gm22997-201ENSMUST00000082845 107 ntBASIC6.68□□□□□ -1.34
Sox18P43680 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.68□□□□□ -1.34
Sox18P43680 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.68□□□□□ -1.34
Sox18P43680 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Sox18P43680 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Sox18P43680 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Sox18P43680 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Sox18P43680 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.68□□□□□ -1.34
Sox18P43680 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Sox18P43680 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Sox18P43680 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Sox18P43680 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox18P43680 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm12805-201ENSMUST00000117305 1048 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm13355-201ENSMUST00000117996 317 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm13880-201ENSMUST00000118421 474 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm12740-201ENSMUST00000118794 308 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm24909-201ENSMUST00000157290 280 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm3140-201ENSMUST00000163523 481 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm20401-201ENSMUST00000173717 212 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Mir3078-201ENSMUST00000175231 87 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm26455-201ENSMUST00000175300 92 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox18P43680 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm27976-201ENSMUST00000183635 162 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm27193-201ENSMUST00000184217 586 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm6501-201ENSMUST00000187178 916 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm35108-201ENSMUST00000194321 699 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm33191-201ENSMUST00000195604 699 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm29784-201ENSMUST00000196217 406 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm44566-201ENSMUST00000207638 304 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm45365-201ENSMUST00000209489 256 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm18924-201ENSMUST00000211929 316 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm2089-201ENSMUST00000218294 479 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Gm7198-201ENSMUST00000219635 1074 ntBASIC6.67□□□□□ -1.34
Sox18P43680 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.67□□□□□ -1.34
Sox18P43680 CT030184.1-201ENSMUST00000222393 416 ntBASIC6.67□□□□□ -1.34
Sox18P43680 AC173482.4-201ENSMUST00000225096 348 ntBASIC6.67□□□□□ -1.34
Sox18P43680 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.67□□□□□ -1.34
Sox18P43680 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.67□□□□□ -1.34
Sox18P43680 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.67□□□□□ -1.34
Sox18P43680 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
Sox18P43680 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm37652-201ENSMUST00000195290 2095 ntBASIC6.67□□□□□ -1.34
Sox18P43680 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Sox18P43680 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Sox18P43680 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Sox18P43680 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Sox18P43680 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Sox18P43680 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Sox18P43680 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Sox18P43680 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.66□□□□□ -1.34
Sox18P43680 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Sox18P43680 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Sox18P43680 AC129208.1-201ENSMUST00000227474 2906 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms