Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
Hoxb3P09026 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Hoxb3P09026 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
Hoxb3P09026 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Hoxb3P09026 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Hoxb3P09026 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm44220-201ENSMUST00000203784 2487 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm13733-201ENSMUST00000117290 535 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm14512-201ENSMUST00000117924 230 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
Hoxb3P09026 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm24407-201ENSMUST00000177864 141 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm27037-201ENSMUST00000182270 960 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxb3P09026 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm18007-201ENSMUST00000205019 844 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm44565-201ENSMUST00000208194 269 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm45782-201ENSMUST00000212670 366 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm18541-201ENSMUST00000215935 538 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.93□□□□□ -1.3
Hoxb3P09026 CT485612.2-201ENSMUST00000223014 151 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Clec2j-201ENSMUST00000032517 515 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm8724-201ENSMUST00000081668 483 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm23515-201ENSMUST00000082829 107 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm22572-201ENSMUST00000082985 105 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm24316-201ENSMUST00000083041 107 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.93□□□□□ -1.3
Hoxb3P09026 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Hoxb3P09026 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Hoxb3P09026 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.92□□□□□ -1.3
Hoxb3P09026 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Hoxb3P09026 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.92□□□□□ -1.3
Hoxb3P09026 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Hoxb3P09026 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Hoxb3P09026 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Hoxb3P09026 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Hoxb3P09026 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Hoxb3P09026 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.92□□□□□ -1.3
Hoxb3P09026 Gm12149-201ENSMUST00000117511 654 ntBASIC6.92□□□□□ -1.3
Hoxb3P09026 Gm14930-201ENSMUST00000118864 652 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms