Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45499-201ENSMUST00000211656 280 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm23736-201ENSMUST00000082553 75 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.71□□□□□ -1.66
Col6a3E9PWQ3 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm13250-201ENSMUST00000117209 753 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm16107-201ENSMUST00000162523 862 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm23532-201ENSMUST00000104569 112 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 n-R5s98-201ENSMUST00000122549 119 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm7967-202ENSMUST00000191042 5042 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm16106-201ENSMUST00000119187 294 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Mir3103-201ENSMUST00000175474 67 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Gm43895-201ENSMUST00000203219 855 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.7□□□□□ -1.66
Col6a3E9PWQ3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm12071-201ENSMUST00000121968 469 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm6632-201ENSMUST00000168425 954 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm43044-201ENSMUST00000198091 379 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm43842-201ENSMUST00000202890 2982 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Gm37603-201ENSMUST00000192368 219 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a3E9PWQ3 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm44193-201ENSMUST00000204822 2523 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm25272-201ENSMUST00000104293 128 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm11486-201ENSMUST00000107322 478 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm9003-201ENSMUST00000121810 482 ntBASIC4.68□□□□□ -1.66
Col6a3E9PWQ3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms