Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm22350-201ENSMUST00000083924 156 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.38□□□□□ -1.71
Nkx3-1P97436 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Nkx3-1P97436 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm22899-201ENSMUST00000104540 131 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm12985-201ENSMUST00000118376 183 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm12328-201ENSMUST00000118611 197 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm12988-201ENSMUST00000119054 478 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm15357-201ENSMUST00000119160 285 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm11822-201ENSMUST00000119177 415 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm15120-201ENSMUST00000120602 301 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm5383-201ENSMUST00000121177 617 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm3362-201ENSMUST00000148102 466 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm26350-201ENSMUST00000157531 288 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm24217-201ENSMUST00000158260 133 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm27820-201ENSMUST00000183628 175 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm6717-201ENSMUST00000185549 838 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm5842-201ENSMUST00000195073 622 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm19617-201ENSMUST00000202977 308 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm3816-201ENSMUST00000209803 433 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm8264-201ENSMUST00000217801 465 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm46191-201ENSMUST00000218899 433 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm8158-201ENSMUST00000219220 465 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm8112-201ENSMUST00000219637 465 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm5215-201ENSMUST00000054380 405 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.37□□□□□ -1.71
Nkx3-1P97436 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx3-1P97436 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm25419-201ENSMUST00000104215 191 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm11790-201ENSMUST00000119569 455 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm15828-201ENSMUST00000119911 522 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm23837-201ENSMUST00000122656 286 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm25278-201ENSMUST00000157267 120 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm25861-201ENSMUST00000158251 109 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm6047-201ENSMUST00000167221 574 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Mir6416-201ENSMUST00000183664 117 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm29036-201ENSMUST00000189967 877 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm32308-201ENSMUST00000203053 280 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm7040-201ENSMUST00000223271 443 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.36□□□□□ -1.71
Nkx3-1P97436 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx3-1P97436 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms