Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdhb3Q91XZ7 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdhb3Q91XZ7 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdhb3Q91XZ7 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdhb3Q91XZ7 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Pcdhb3Q91XZ7 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 AC151831.1-201ENSMUST00000227609 4033 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm22439-201ENSMUST00000104048 132 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm24338-201ENSMUST00000104205 127 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm8624-201ENSMUST00000118083 432 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm13229-201ENSMUST00000118238 340 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm13545-201ENSMUST00000119044 482 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm23069-201ENSMUST00000158240 311 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm6838-201ENSMUST00000172851 582 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm25692-201ENSMUST00000175444 125 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm21182-201ENSMUST00000178899 794 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm3121-201ENSMUST00000187086 406 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm43590-201ENSMUST00000195987 387 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm42832-201ENSMUST00000196361 745 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm3103-201ENSMUST00000198073 752 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm19202-201ENSMUST00000198096 808 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Pcdhb3Q91XZ7 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm25088-201ENSMUST00000101803 79 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm25083-201ENSMUST00000102319 92 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm12765-201ENSMUST00000117273 615 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm11268-201ENSMUST00000118347 267 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm14202-201ENSMUST00000120121 311 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm15168-201ENSMUST00000121057 316 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm23499-201ENSMUST00000157736 268 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm25334-201ENSMUST00000158036 110 ntBASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Pcdhb3Q91XZ7 Gm20549-201ENSMUST00000174804 429 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms