Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PrkdcP97313 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PrkdcP97313 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm27165-201ENSMUST00000183951 232 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm18802-201ENSMUST00000186270 888 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PrkdcP97313 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PrkdcP97313 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
PrkdcP97313 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.29□□□□□ -1.88
PrkdcP97313 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PrkdcP97313 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm37018-201ENSMUST00000192441 3869 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 AC121997.2-201ENSMUST00000228095 2294 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PrkdcP97313 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm37183-201ENSMUST00000191712 3405 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm14621-201ENSMUST00000117709 689 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm27037-201ENSMUST00000182270 960 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm28314-201ENSMUST00000191276 345 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm4248-201ENSMUST00000196905 316 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
PrkdcP97313 Gm45553-201ENSMUST00000209929 507 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Mir383-201ENSMUST00000083523 70 ntBASIC3.29□□□□□ -1.88
PrkdcP97313 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PrkdcP97313 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PrkdcP97313 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
PrkdcP97313 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm43605-201ENSMUST00000199663 3426 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm14086-201ENSMUST00000117152 173 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm9043-201ENSMUST00000119677 314 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm14784-201ENSMUST00000121604 663 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm27249-201ENSMUST00000185049 328 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm7634-201ENSMUST00000185778 553 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm5027-201ENSMUST00000206700 375 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Gm19921-201ENSMUST00000210505 703 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 AC133203.2-201ENSMUST00000226709 464 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm43502-201ENSMUST00000200263 2596 ntBASIC3.28□□□□□ -1.88
PrkdcP97313 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PrkdcP97313 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PrkdcP97313 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PrkdcP97313 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms