Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Vps29Q9QZ88 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps29Q9QZ88 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps29Q9QZ88 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps29Q9QZ88 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vps29Q9QZ88 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Vps29Q9QZ88 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.95■□□□□ 0.3
Vps29Q9QZ88 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps29Q9QZ88 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.94■□□□□ 0.3
Vps29Q9QZ88 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Gm11927-201ENSMUST00000118472 759 ntBASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps29Q9QZ88 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Gm10602-201ENSMUST00000098239 609 ntBASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps29Q9QZ88 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps29Q9QZ88 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps29Q9QZ88 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms