Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgc3Q91XX1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgc3Q91XX1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Gm43017-201ENSMUST00000198296 752 ntBASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhgc3Q91XX1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgc3Q91XX1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgc3Q91XX1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgc3Q91XX1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms