Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sh3kbp1Q8R550 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh3kbp1Q8R550 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3kbp1Q8R550 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh3kbp1Q8R550 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sh3kbp1Q8R550 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sh3kbp1Q8R550 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Zfp783-201ENSMUST00000095946 670 ntBASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Tgds-204ENSMUST00000228543 1594 ntBASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3kbp1Q8R550 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3kbp1Q8R550 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3kbp1Q8R550 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms