Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.11□□□□□ -0.63
Cystm1Q8K353 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cystm1Q8K353 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.1□□□□□ -0.63
Cystm1Q8K353 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Cystm1Q8K353 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.09□□□□□ -0.63
Cystm1Q8K353 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cystm1Q8K353 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cystm1Q8K353 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC11.08□□□□□ -0.64
Cystm1Q8K353 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cystm1Q8K353 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms