Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx6Q8C7R7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx6Q8C7R7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx6Q8C7R7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx6Q8C7R7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx6Q8C7R7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfx6Q8C7R7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx6Q8C7R7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms