Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps9d1Q8C190 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.58■□□□□ 0.25
Vps9d1Q8C190 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps9d1Q8C190 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Gm8969-201ENSMUST00000199694 526 ntBASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps9d1Q8C190 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Gm7514-201ENSMUST00000209475 934 ntBASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vps9d1Q8C190 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps9d1Q8C190 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps9d1Q8C190 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.53■□□□□ 0.24
Vps9d1Q8C190 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms