Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc44a2Q8BY89 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Gm18284-201ENSMUST00000172604 624 ntBASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc44a2Q8BY89 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Gm42642-201ENSMUST00000200683 355 ntBASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc44a2Q8BY89 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Gm18671-201ENSMUST00000214826 683 ntBASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc44a2Q8BY89 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc44a2Q8BY89 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc44a2Q8BY89 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.21■□□□□ 0.34
Slc44a2Q8BY89 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc44a2Q8BY89 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc44a2Q8BY89 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc44a2Q8BY89 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc44a2Q8BY89 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.18■□□□□ 0.34
Slc44a2Q8BY89 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc44a2Q8BY89 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc44a2Q8BY89 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms