Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npas4Q8BGD7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Gm5587-201ENSMUST00000206270 674 ntBASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npas4Q8BGD7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npas4Q8BGD7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Npas4Q8BGD7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 Gm9013-201ENSMUST00000132939 882 ntBASIC18.64■□□□□ 0.57
Npas4Q8BGD7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.64■□□□□ 0.57
Npas4Q8BGD7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.63■□□□□ 0.57
Npas4Q8BGD7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Gm7213-201ENSMUST00000215977 950 ntBASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Npas4Q8BGD7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Gm27704-201ENSMUST00000185094 107 ntBASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Npas4Q8BGD7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas4Q8BGD7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas4Q8BGD7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Npas4Q8BGD7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms