Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Skida1Q80YR3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Skida1Q80YR3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.57■□□□□ 0.4
Skida1Q80YR3 Gm28180-201ENSMUST00000189608 722 ntBASIC17.57■□□□□ 0.4
Skida1Q80YR3 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Gm44353-201ENSMUST00000200618 138 ntBASIC17.57■□□□□ 0.4
Skida1Q80YR3 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Skida1Q80YR3 AC153932.1-201ENSMUST00000218558 787 ntBASIC17.57■□□□□ 0.4
Skida1Q80YR3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.57■□□□□ 0.4
Skida1Q80YR3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Skida1Q80YR3 Gm44286-201ENSMUST00000204098 1487 ntBASIC17.56■□□□□ 0.4
Skida1Q80YR3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.56■□□□□ 0.4
Skida1Q80YR3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.56■□□□□ 0.4
Skida1Q80YR3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC17.56■□□□□ 0.4
Skida1Q80YR3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.56■□□□□ 0.4
Skida1Q80YR3 AC153968.2-201ENSMUST00000215579 1140 ntBASIC17.56■□□□□ 0.4
Skida1Q80YR3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
Skida1Q80YR3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Gm37866-201ENSMUST00000191950 696 ntBASIC17.55■□□□□ 0.4
Skida1Q80YR3 Gm36966-201ENSMUST00000192217 413 ntBASIC17.55■□□□□ 0.4
Skida1Q80YR3 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC17.55■□□□□ 0.4
Skida1Q80YR3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Skida1Q80YR3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Gm14539-201ENSMUST00000117527 174 ntBASIC17.54■□□□□ 0.4
Skida1Q80YR3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.54■□□□□ 0.4
Skida1Q80YR3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.54■□□□□ 0.4
Skida1Q80YR3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Skida1Q80YR3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.54■□□□□ 0.4
Skida1Q80YR3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.54■□□□□ 0.4
Skida1Q80YR3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Skida1Q80YR3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Gm14739-201ENSMUST00000120424 802 ntBASIC17.53■□□□□ 0.4
Skida1Q80YR3 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.53■□□□□ 0.4
Skida1Q80YR3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.53■□□□□ 0.4
Skida1Q80YR3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Skida1Q80YR3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms