Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sox16Q62247 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC10.08□□□□□ -0.8
Sox16Q62247 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sox16Q62247 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Sox16Q62247 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sox16Q62247 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sox16Q62247 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sox16Q62247 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Sox16Q62247 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Sox16Q62247 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Sox16Q62247 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Sox16Q62247 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC10.07□□□□□ -0.8
Sox16Q62247 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC10.07□□□□□ -0.8
Sox16Q62247 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sox16Q62247 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sox16Q62247 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sox16Q62247 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sox16Q62247 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sox16Q62247 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Phf7-203ENSMUST00000226565 1971 ntBASIC10.06□□□□□ -0.8
Sox16Q62247 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sox16Q62247 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.06□□□□□ -0.8
Sox16Q62247 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC10.05□□□□□ -0.8
Sox16Q62247 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Sox16Q62247 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sox16Q62247 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.05□□□□□ -0.8
Sox16Q62247 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms