Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Itm2aQ61500 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Itm2aQ61500 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Itm2aQ61500 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Itm2aQ61500 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Itm2aQ61500 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Itm2aQ61500 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
Itm2aQ61500 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Itm2aQ61500 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Itm2aQ61500 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.41■□□□□ 0.38
Itm2aQ61500 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Itm2aQ61500 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Itm2aQ61500 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
Itm2aQ61500 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.4■□□□□ 0.38
Itm2aQ61500 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.4■□□□□ 0.38
Itm2aQ61500 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Itm2aQ61500 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Itm2aQ61500 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Itm2aQ61500 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.4■□□□□ 0.38
Itm2aQ61500 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Itm2aQ61500 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Itm2aQ61500 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.4■□□□□ 0.38
Itm2aQ61500 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Itm2aQ61500 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Itm2aQ61500 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Itm2aQ61500 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Itm2aQ61500 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Itm2aQ61500 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Itm2aQ61500 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
Itm2aQ61500 Nespas-201ENSMUST00000143738 1083 ntBASIC17.39■□□□□ 0.37
Itm2aQ61500 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.39■□□□□ 0.37
Itm2aQ61500 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Itm2aQ61500 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Itm2aQ61500 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Itm2aQ61500 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Itm2aQ61500 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
Itm2aQ61500 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.38■□□□□ 0.37
Itm2aQ61500 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Itm2aQ61500 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.38■□□□□ 0.37
Itm2aQ61500 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Itm2aQ61500 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Itm2aQ61500 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Itm2aQ61500 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms