Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gm42642-201ENSMUST00000200683 355 ntBASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Gm10033-202ENSMUST00000211874 928 ntBASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav7d-3Q5R1I1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav7d-3Q5R1I1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Gm5874-201ENSMUST00000096101 508 ntBASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Fst-202ENSMUST00000223640 2612 ntBASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7d-3Q5R1I1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Gm8969-201ENSMUST00000199694 526 ntBASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7d-3Q5R1I1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7d-3Q5R1I1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms