Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vps13aQ5H8C4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Gm10418-201ENSMUST00000100943 576 ntBASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps13aQ5H8C4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Auts2-212ENSMUST00000178555 309 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Gm43575-201ENSMUST00000196420 516 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps13aQ5H8C4 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.58■□□□□ 0.41
Vps13aQ5H8C4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps13aQ5H8C4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Vps13aQ5H8C4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps13aQ5H8C4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps13aQ5H8C4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13aQ5H8C4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Gm11355-201ENSMUST00000121120 306 ntBASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.57■□□□□ 0.4
Vps13aQ5H8C4 Mir770-201ENSMUST00000103252 94 ntBASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13aQ5H8C4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13aQ5H8C4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms