Protein–RNA interactions for Protein: Q32KG4

Rtl9, Retrotransposon Gag-like protein 9, mousemouse

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl9Q32KG4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rtl9Q32KG4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rtl9Q32KG4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rtl9Q32KG4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rtl9Q32KG4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Rtl9Q32KG4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rtl9Q32KG4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rtl9Q32KG4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Tgds-204ENSMUST00000228543 1594 ntBASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rtl9Q32KG4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Gm15565-201ENSMUST00000118890 427 ntBASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Gm13836-201ENSMUST00000121159 501 ntBASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rtl9Q32KG4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms