Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Gm18025-201ENSMUST00000221733 862 ntBASIC16.71■□□□□ 0.27
Nkx3-2P97503 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx3-2P97503 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Nkx3-2P97503 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.7■□□□□ 0.26
Nkx3-2P97503 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.7■□□□□ 0.26
Nkx3-2P97503 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.7■□□□□ 0.26
Nkx3-2P97503 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx3-2P97503 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx3-2P97503 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx3-2P97503 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.68■□□□□ 0.26
Nkx3-2P97503 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx3-2P97503 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.67■□□□□ 0.26
Nkx3-2P97503 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.67■□□□□ 0.26
Nkx3-2P97503 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.67■□□□□ 0.26
Nkx3-2P97503 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx3-2P97503 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.67■□□□□ 0.26
Nkx3-2P97503 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkx3-2P97503 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx3-2P97503 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Mir5122-201ENSMUST00000175004 89 ntBASIC16.66■□□□□ 0.26
Nkx3-2P97503 Gm37055-201ENSMUST00000191866 133 ntBASIC16.66■□□□□ 0.26
Nkx3-2P97503 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Nkx3-2P97503 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx3-2P97503 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms