Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rab4aP56371 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rab4aP56371 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rab4aP56371 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Rab4aP56371 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rab4aP56371 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.16
Rab4aP56371 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rab4aP56371 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rab4aP56371 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rab4aP56371 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.01□□□□□ -0.17
Rab4aP56371 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rab4aP56371 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rab4aP56371 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.01□□□□□ -0.17
Rab4aP56371 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rab4aP56371 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rab4aP56371 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rab4aP56371 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Rab4aP56371 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14□□□□□ -0.17
Rab4aP56371 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Gm43213-201ENSMUST00000151866 1790 ntBASIC14□□□□□ -0.17
Rab4aP56371 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Rab4aP56371 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rab4aP56371 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rab4aP56371 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rab4aP56371 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rab4aP56371 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Rab4aP56371 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.99□□□□□ -0.17
Rab4aP56371 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rab4aP56371 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Rab4aP56371 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rab4aP56371 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab4aP56371 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab4aP56371 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rab4aP56371 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rab4aP56371 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms