Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rph3aP47708 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rph3aP47708 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Gm11249-201ENSMUST00000117071 859 ntBASIC17.04■□□□□ 0.32
Rph3aP47708 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.04■□□□□ 0.32
Rph3aP47708 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.04■□□□□ 0.32
Rph3aP47708 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rph3aP47708 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rph3aP47708 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rph3aP47708 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.02■□□□□ 0.32
Rph3aP47708 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Gm27275-201ENSMUST00000184318 272 ntBASIC17.02■□□□□ 0.32
Rph3aP47708 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rph3aP47708 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Rph3aP47708 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rph3aP47708 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rph3aP47708 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.01■□□□□ 0.31
Rph3aP47708 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Rph3aP47708 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.01■□□□□ 0.31
Rph3aP47708 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.01■□□□□ 0.31
Rph3aP47708 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.01■□□□□ 0.31
Rph3aP47708 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Gm37856-201ENSMUST00000191634 999 ntBASIC17.01■□□□□ 0.31
Rph3aP47708 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.01■□□□□ 0.31
Rph3aP47708 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rph3aP47708 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rph3aP47708 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17■□□□□ 0.31
Rph3aP47708 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Mtag2-201ENSMUST00000058665 714 ntBASIC17■□□□□ 0.31
Rph3aP47708 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Gm37374-201ENSMUST00000194954 1829 ntBASIC17■□□□□ 0.31
Rph3aP47708 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rph3aP47708 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rph3aP47708 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.99■□□□□ 0.31
Rph3aP47708 Trmt13-210ENSMUST00000198454 880 ntBASIC16.99■□□□□ 0.31
Rph3aP47708 Gm10138-203ENSMUST00000206952 366 ntBASIC16.99■□□□□ 0.31
Rph3aP47708 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.99■□□□□ 0.31
Rph3aP47708 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.99■□□□□ 0.31
Rph3aP47708 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rph3aP47708 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.99■□□□□ 0.31
Rph3aP47708 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rph3aP47708 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rph3aP47708 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.98■□□□□ 0.31
Rph3aP47708 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms