Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.88□□□□□ -0.03
Cd74P04441 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Cd74P04441 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.88□□□□□ -0.03
Cd74P04441 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd74P04441 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.87□□□□□ -0.03
Cd74P04441 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cd74P04441 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cd74P04441 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.87□□□□□ -0.03
Cd74P04441 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.87□□□□□ -0.03
Cd74P04441 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.87□□□□□ -0.03
Cd74P04441 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cd74P04441 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cd74P04441 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd74P04441 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.86□□□□□ -0.03
Cd74P04441 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.86□□□□□ -0.03
Cd74P04441 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.86□□□□□ -0.03
Cd74P04441 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Gm2559-201ENSMUST00000201323 363 ntBASIC14.86□□□□□ -0.03
Cd74P04441 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.86□□□□□ -0.03
Cd74P04441 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Cd74P04441 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Gm10812-201ENSMUST00000099864 546 ntBASIC14.86□□□□□ -0.03
Cd74P04441 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd74P04441 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cd74P04441 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.85□□□□□ -0.03
Cd74P04441 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.85□□□□□ -0.03
Cd74P04441 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cd74P04441 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.85□□□□□ -0.03
Cd74P04441 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.85□□□□□ -0.03
Cd74P04441 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cd74P04441 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.85□□□□□ -0.03
Cd74P04441 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd74P04441 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.85□□□□□ -0.03
Cd74P04441 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.84□□□□□ -0.03
Cd74P04441 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cd74P04441 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.84□□□□□ -0.03
Cd74P04441 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.84□□□□□ -0.03
Cd74P04441 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cd74P04441 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cd74P04441 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd74P04441 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms