Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10509O88255 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10509O88255 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm10509O88255 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm10509O88255 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm10509O88255 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.64□□□□□ -0.39
Gm10509O88255 Gm10418-201ENSMUST00000100943 576 ntBASIC12.64□□□□□ -0.39
Gm10509O88255 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Gm26571-201ENSMUST00000181399 666 ntBASIC12.64□□□□□ -0.39
Gm10509O88255 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm10509O88255 Gm44549-201ENSMUST00000208351 577 ntBASIC12.64□□□□□ -0.39
Gm10509O88255 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm10509O88255 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Zfp783-201ENSMUST00000095946 670 ntBASIC12.64□□□□□ -0.39
Gm10509O88255 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10509O88255 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.63□□□□□ -0.39
Gm10509O88255 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Gm29791-202ENSMUST00000207888 369 ntBASIC12.63□□□□□ -0.39
Gm10509O88255 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.63□□□□□ -0.39
Gm10509O88255 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.63□□□□□ -0.39
Gm10509O88255 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm10509O88255 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Gm10509O88255 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10509O88255 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.62□□□□□ -0.39
Gm10509O88255 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Flg-201ENSMUST00000050758 1488 ntBASIC12.62□□□□□ -0.39
Gm10509O88255 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Gm42569-201ENSMUST00000200539 472 ntBASIC12.62□□□□□ -0.39
Gm10509O88255 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Gm10509O88255 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10509O88255 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm10509O88255 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Gm10509O88255 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10509O88255 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms