Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capn1O35350 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.37■□□□□ 0.21
Capn1O35350 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.37■□□□□ 0.21
Capn1O35350 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.37■□□□□ 0.21
Capn1O35350 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.37■□□□□ 0.21
Capn1O35350 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Capn1O35350 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.37■□□□□ 0.21
Capn1O35350 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Capn1O35350 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Capn1O35350 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Capn1O35350 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Capn1O35350 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Capn1O35350 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Capn1O35350 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Capn1O35350 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.36■□□□□ 0.21
Capn1O35350 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Capn1O35350 Zfp783-201ENSMUST00000095946 670 ntBASIC16.36■□□□□ 0.21
Capn1O35350 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Capn1O35350 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capn1O35350 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Gm37055-201ENSMUST00000191866 133 ntBASIC16.35■□□□□ 0.21
Capn1O35350 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Mtag2-201ENSMUST00000058665 714 ntBASIC16.35■□□□□ 0.21
Capn1O35350 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
Capn1O35350 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Capn1O35350 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Capn1O35350 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capn1O35350 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Capn1O35350 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Capn1O35350 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Capn1O35350 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Capn1O35350 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Capn1O35350 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.34■□□□□ 0.21
Capn1O35350 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
Capn1O35350 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.34■□□□□ 0.21
Capn1O35350 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capn1O35350 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Capn1O35350 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.33■□□□□ 0.2
Capn1O35350 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.33■□□□□ 0.2
Capn1O35350 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.33■□□□□ 0.2
Capn1O35350 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Capn1O35350 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capn1O35350 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms