Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim17A0A504 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smim17A0A504 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smim17A0A504 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smim17A0A504 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim17A0A504 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smim17A0A504 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.09■□□□□ 0.17
Smim17A0A504 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Smim17A0A504 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim17A0A504 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smim17A0A504 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.08■□□□□ 0.17
Smim17A0A504 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim17A0A504 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.08■□□□□ 0.16
Smim17A0A504 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim17A0A504 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smim17A0A504 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.08■□□□□ 0.16
Smim17A0A504 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smim17A0A504 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smim17A0A504 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim17A0A504 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Smim17A0A504 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.08■□□□□ 0.16
Smim17A0A504 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.07■□□□□ 0.16
Smim17A0A504 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smim17A0A504 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Smim17A0A504 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim17A0A504 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Smim17A0A504 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smim17A0A504 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smim17A0A504 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.06■□□□□ 0.16
Smim17A0A504 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.06■□□□□ 0.16
Smim17A0A504 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.06■□□□□ 0.16
Smim17A0A504 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim17A0A504 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Smim17A0A504 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smim17A0A504 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.05■□□□□ 0.16
Smim17A0A504 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.05■□□□□ 0.16
Smim17A0A504 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smim17A0A504 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smim17A0A504 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smim17A0A504 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim17A0A504 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smim17A0A504 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Smim17A0A504 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smim17A0A504 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smim17A0A504 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim17A0A504 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim17A0A504 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms