Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trbv17A0A140T8P8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.56□□□□□ -0.24
Trbv17A0A140T8P8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv17A0A140T8P8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Gm44549-201ENSMUST00000208351 577 ntBASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv17A0A140T8P8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv17A0A140T8P8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms