Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm11421-201ENSMUST00000122124 294 ntBASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav3n-3A0A0G2JEM0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm27801-201ENSMUST00000184174 223 ntBASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3n-3A0A0G2JEM0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms