Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm13534-201ENSMUST00000121169 513 ntBASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ighv1-23A0A0A6YVW3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Idnk-204ENSMUST00000226010 1898 ntBASIC13.19□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm13234-201ENSMUST00000120010 747 ntBASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gm10493-201ENSMUST00000097270 612 ntBASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ighv1-23A0A0A6YVW3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms