Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Gm42501-201ENSMUST00000200220 1026 ntBASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav8-1A0A075B641 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav8-1A0A075B641 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Dancr-204ENSMUST00000132389 2347 ntBASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav8-1A0A075B641 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav8-1A0A075B641 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav8-1A0A075B641 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms