Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9n-4A0A075B631 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav9n-4A0A075B631 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gm42642-201ENSMUST00000200683 355 ntBASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav9n-4A0A075B631 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Gm10033-202ENSMUST00000211874 928 ntBASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav9n-4A0A075B631 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav9n-4A0A075B631 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms