Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav7n-5A0A075B604 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav7n-5A0A075B604 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Gm37292-201ENSMUST00000192062 758 ntBASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav7n-5A0A075B604 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav7n-5A0A075B604 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7n-5A0A075B604 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Gm6576-201ENSMUST00000169678 883 ntBASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7n-5A0A075B604 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Mir1199-201ENSMUST00000117015 119 ntBASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7n-5A0A075B604 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms