Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm22916-201ENSMUST00000157616 119 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm23774-201ENSMUST00000158990 131 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm44319-201ENSMUST00000196974 93 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm2961-201ENSMUST00000211074 772 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm25102-201ENSMUST00000122479 112 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm6872-201ENSMUST00000165001 700 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm18537-201ENSMUST00000205709 989 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm19256-201ENSMUST00000218550 231 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Diaph3-206ENSMUST00000226745 713 ntBASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.34□□□□□ -1.39
Vps53Q8CCB4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Vps53Q8CCB4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
Vps53Q8CCB4 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Vps53Q8CCB4 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Vps53Q8CCB4 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm24340-201ENSMUST00000104208 97 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm6134-201ENSMUST00000117265 171 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm13259-201ENSMUST00000120792 456 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms