Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 CU062626.1-201ENSMUST00000225248 505 ntBASIC4.33□□□□□ -1.72
Cdx1P18111 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Gm5229-201ENSMUST00000039375 354 ntBASIC4.33□□□□□ -1.72
Cdx1P18111 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Cdx1P18111 Mir143-201ENSMUST00000083511 63 ntBASIC4.33□□□□□ -1.72
Cdx1P18111 Gm24029-201ENSMUST00000083928 143 ntBASIC4.33□□□□□ -1.72
Cdx1P18111 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx1P18111 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.33□□□□□ -1.72
Cdx1P18111 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx1P18111 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.33□□□□□ -1.72
Cdx1P18111 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Cdx1P18111 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Cdx1P18111 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Mir449c-201ENSMUST00000102192 109 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm25919-201ENSMUST00000104271 132 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Mir466j-201ENSMUST00000116876 122 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm13870-201ENSMUST00000117214 1023 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm8501-201ENSMUST00000117684 432 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm14885-201ENSMUST00000117969 496 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm26106-201ENSMUST00000157254 228 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm20480-201ENSMUST00000173953 250 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm24303-201ENSMUST00000178237 126 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm28640-201ENSMUST00000190918 550 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm8556-201ENSMUST00000210437 664 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.32□□□□□ -1.72
Cdx1P18111 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 AC168056.2-201ENSMUST00000223591 269 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx1P18111 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm22807-201ENSMUST00000082737 129 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cdx1P18111 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cdx1P18111 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.32□□□□□ -1.72
Cdx1P18111 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Cdx1P18111 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cdx1P18111 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.31□□□□□ -1.72
Cdx1P18111 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cdx1P18111 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Cdx1P18111 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx1P18111 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cdx1P18111 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cdx1P18111 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.31□□□□□ -1.72
Cdx1P18111 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.31□□□□□ -1.72
Cdx1P18111 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.31□□□□□ -1.72
Cdx1P18111 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms