Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm44527-202ENSMUST00000204519 1314 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm12901-201ENSMUST00000118690 532 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm15452-201ENSMUST00000119877 240 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm13602-201ENSMUST00000122405 493 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm23792-201ENSMUST00000122557 93 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm23981-201ENSMUST00000157136 106 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm22820-201ENSMUST00000157205 329 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm26173-201ENSMUST00000158416 136 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm9597-201ENSMUST00000171913 602 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm19560-201ENSMUST00000177510 514 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm28343-201ENSMUST00000185386 112 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Mrgprb13-201ENSMUST00000188191 985 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Trbv22-201ENSMUST00000191697 291 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm2979-201ENSMUST00000193442 463 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm20940-201ENSMUST00000197308 360 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 AC102369.1-201ENSMUST00000218415 373 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm9293-201ENSMUST00000223096 306 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 mt-Td-201ENSMUST00000082404 70 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm10997-201ENSMUST00000210294 1500 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nkx6-1Q99MA9 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm16436-201ENSMUST00000121510 1607 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm42606-201ENSMUST00000114209 239 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm7146-201ENSMUST00000116079 739 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm13641-201ENSMUST00000117993 473 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm6664-201ENSMUST00000119138 468 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm11852-201ENSMUST00000120806 222 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm13000-201ENSMUST00000120937 496 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm12819-201ENSMUST00000122223 629 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm26349-201ENSMUST00000157530 130 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm26037-201ENSMUST00000158150 311 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm5947-201ENSMUST00000179156 714 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm5645-201ENSMUST00000179597 714 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm27266-201ENSMUST00000184521 123 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm28080-201ENSMUST00000188552 722 ntBASIC6.07□□□□□ -1.44
Nkx6-1Q99MA9 Gm37609-201ENSMUST00000191778 678 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms