Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Nup98Q6PFD9 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6□□□□□ -1.45
Nup98Q6PFD9 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6□□□□□ -1.45
Nup98Q6PFD9 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6□□□□□ -1.45
Nup98Q6PFD9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Nup98Q6PFD9 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nup98Q6PFD9 Gm43281-201ENSMUST00000202522 2704 ntBASIC6□□□□□ -1.45
Nup98Q6PFD9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm24855-201ENSMUST00000104848 97 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm29086-201ENSMUST00000186774 222 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm29085-201ENSMUST00000187108 225 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm37492-201ENSMUST00000191948 376 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm43961-201ENSMUST00000203289 1872 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm13733-201ENSMUST00000117290 535 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm26098-201ENSMUST00000157247 288 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gm26330-201ENSMUST00000082817 104 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nup98Q6PFD9 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm14388-201ENSMUST00000118119 477 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm13867-201ENSMUST00000120844 395 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm12466-201ENSMUST00000121199 620 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm20056-201ENSMUST00000194813 519 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm2522-201ENSMUST00000204280 322 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm44603-201ENSMUST00000206820 367 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm4290-201ENSMUST00000206897 814 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm46327-201ENSMUST00000218240 365 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Nup98Q6PFD9 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms