Protein–RNA interactions for Protein: Q9H0N0

RAB6C, Ras-related protein Rab-6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ9H0N0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 AL391422.3-201ENST00000603791 2761 ntBASIC21.29■■□□□ 1
RAB6CQ9H0N0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB6CQ9H0N0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB6CQ9H0N0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.28■■□□□ 1
RAB6CQ9H0N0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.28■■□□□ 1
RAB6CQ9H0N0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAB6CQ9H0N0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 AC020907.5-201ENST00000624372 1936 ntBASIC21.28■■□□□ 1
RAB6CQ9H0N0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.28■■□□□ 1
RAB6CQ9H0N0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAB6CQ9H0N0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB6CQ9H0N0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.27■■□□□ 1
RAB6CQ9H0N0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 AL512408.1-201ENST00000569378 2000 ntBASIC21.27■■□□□ 1
RAB6CQ9H0N0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB6CQ9H0N0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB6CQ9H0N0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.27■□□□□ 0.99
RAB6CQ9H0N0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.27■□□□□ 0.99
RAB6CQ9H0N0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB6CQ9H0N0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RAB6CQ9H0N0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB6CQ9H0N0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 KRT8P36-201ENST00000489121 1440 ntBASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 AC010980.2-201ENST00000587099 1412 ntBASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB6CQ9H0N0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms