Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr1Q9CY50 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr1Q9CY50 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Gm10033-202ENSMUST00000211874 928 ntBASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr1Q9CY50 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr1Q9CY50 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ssr1Q9CY50 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssr1Q9CY50 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Ssr1Q9CY50 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms