Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1aQ9CU62 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Gm5643-201ENSMUST00000117081 966 ntBASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smc1aQ9CU62 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smc1aQ9CU62 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smc1aQ9CU62 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc1aQ9CU62 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc1aQ9CU62 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc1aQ9CU62 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Smc1aQ9CU62 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc1aQ9CU62 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms