Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.56■□□□□ 0.08
Scrt1Q99M85 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Scrt1Q99M85 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.55■□□□□ 0.08
Scrt1Q99M85 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Gm10517-202ENSMUST00000192970 758 ntBASIC15.55■□□□□ 0.08
Scrt1Q99M85 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.55■□□□□ 0.08
Scrt1Q99M85 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Scrt1Q99M85 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.54■□□□□ 0.08
Scrt1Q99M85 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.54■□□□□ 0.08
Scrt1Q99M85 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Scrt1Q99M85 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.53■□□□□ 0.08
Scrt1Q99M85 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.53■□□□□ 0.08
Scrt1Q99M85 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gm23634-201ENSMUST00000175071 91 ntBASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gm37292-201ENSMUST00000192062 758 ntBASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gm3375-201ENSMUST00000203929 796 ntBASIC15.53■□□□□ 0.08
Scrt1Q99M85 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Scrt1Q99M85 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.52■□□□□ 0.08
Scrt1Q99M85 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.52■□□□□ 0.08
Scrt1Q99M85 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Zfp783-201ENSMUST00000095946 670 ntBASIC15.52■□□□□ 0.08
Scrt1Q99M85 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Scrt1Q99M85 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scrt1Q99M85 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scrt1Q99M85 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.52■□□□□ 0.07
Scrt1Q99M85 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scrt1Q99M85 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Scrt1Q99M85 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Scrt1Q99M85 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Scrt1Q99M85 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms