Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.88■□□□□ 0.77
PKP4Q99569 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PKP4Q99569 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKP4Q99569 FEM1AP1-201ENST00000431297 1995 ntBASIC19.88■□□□□ 0.77
PKP4Q99569 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP4Q99569 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.87■□□□□ 0.77
PKP4Q99569 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.87■□□□□ 0.77
PKP4Q99569 OR10C1-204ENST00000622521 1039 ntBASIC19.87■□□□□ 0.77
PKP4Q99569 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PKP4Q99569 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKP4Q99569 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PKP4Q99569 AL157384.1-201ENST00000445995 2473 ntBASIC19.86■□□□□ 0.77
PKP4Q99569 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.86■□□□□ 0.77
PKP4Q99569 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PKP4Q99569 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.86■□□□□ 0.77
PKP4Q99569 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP4Q99569 AC093787.1-201ENST00000450396 207 ntBASIC19.86■□□□□ 0.77
PKP4Q99569 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PKP4Q99569 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP4Q99569 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PKP4Q99569 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP4Q99569 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PKP4Q99569 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKP4Q99569 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.86■□□□□ 0.77
PKP4Q99569 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP4Q99569 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP4Q99569 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP4Q99569 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP4Q99569 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.85■□□□□ 0.77
PKP4Q99569 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.85■□□□□ 0.77
PKP4Q99569 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.85■□□□□ 0.77
PKP4Q99569 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP4Q99569 AC133552.2-202ENST00000575694 574 ntBASIC19.85■□□□□ 0.77
PKP4Q99569 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.85■□□□□ 0.77
PKP4Q99569 AC100791.3-201ENST00000617619 330 ntBASIC19.85■□□□□ 0.77
PKP4Q99569 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PKP4Q99569 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.85■□□□□ 0.77
PKP4Q99569 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.85■□□□□ 0.77
PKP4Q99569 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKP4Q99569 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP4Q99569 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP4Q99569 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PKP4Q99569 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
PKP4Q99569 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP4Q99569 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.84■□□□□ 0.77
PKP4Q99569 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PKP4Q99569 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PKP4Q99569 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PKP4Q99569 AC073314.1-201ENST00000568729 2216 ntBASIC19.84■□□□□ 0.77
PKP4Q99569 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP4Q99569 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 KRT8P36-201ENST00000489121 1440 ntBASIC19.84■□□□□ 0.77
PKP4Q99569 AC087633.2-202ENST00000565166 1439 ntBASIC19.84■□□□□ 0.77
PKP4Q99569 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP4Q99569 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP4Q99569 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP4Q99569 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP4Q99569 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP4Q99569 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.83■□□□□ 0.77
PKP4Q99569 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.83■□□□□ 0.77
PKP4Q99569 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP4Q99569 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKP4Q99569 MCRIP2P1-201ENST00000394346 511 ntBASIC19.83■□□□□ 0.77
PKP4Q99569 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms