Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gm37055-201ENSMUST00000191866 133 ntBASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gm43183-201ENSMUST00000200632 547 ntBASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ndc1Q8VCB1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Gm18025-201ENSMUST00000221733 862 ntBASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndc1Q8VCB1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Gm42545-201ENSMUST00000202755 922 ntBASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndc1Q8VCB1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndc1Q8VCB1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms