Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc2Q8CG48 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.33■□□□□ 0.85
Smc2Q8CG48 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smc2Q8CG48 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc2Q8CG48 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smc2Q8CG48 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.32■□□□□ 0.84
Smc2Q8CG48 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.32■□□□□ 0.84
Smc2Q8CG48 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc2Q8CG48 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.31■□□□□ 0.84
Smc2Q8CG48 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.31■□□□□ 0.84
Smc2Q8CG48 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Zfp783-201ENSMUST00000095946 670 ntBASIC20.31■□□□□ 0.84
Smc2Q8CG48 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc2Q8CG48 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc2Q8CG48 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Smc2Q8CG48 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.29■□□□□ 0.84
Smc2Q8CG48 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc2Q8CG48 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc2Q8CG48 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc2Q8CG48 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc2Q8CG48 Gm5408-201ENSMUST00000197998 747 ntBASIC20.28■□□□□ 0.84
Smc2Q8CG48 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.28■□□□□ 0.84
Smc2Q8CG48 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc2Q8CG48 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms