Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smco1Q8CEZ1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco1Q8CEZ1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Gm15820-201ENSMUST00000201566 728 ntBASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco1Q8CEZ1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Smco1Q8CEZ1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
Smco1Q8CEZ1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Smco1Q8CEZ1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smco1Q8CEZ1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smco1Q8CEZ1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms